Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938608.1_cds_XP_016483423.1_74538
CDS Infomation

[gene=LOC107804105] [db_xref=GeneID:107804105] [protein=monocopper oxidase-like protein SKS1] [protein_id=XP_016483423.1] [location=complement(join(123821..123920,124000..124202,124343..124421,124513..124878,125024..125390,125836..125974,126068..126338,126462..126571,127559..127681))] [gbkey=CDS]
Sequence

ATGGGCTGCCGTTTGTGTTGCATTGCTCTGCTCTTCACTCTTTGCTTCGCCGCTGACCCA
TATGTCAATTTTGAGTTGGAATATTCCTACATCACCGTTTCTCCTCTTGGCGTTCCTCAA
CAGGTTATAGCTGTGAATGGGAAATTTCCAGGTCCTGTCCTTAACGTTACAACTAATTAT
AATGTCGTGGTGAACGTGAAGAACAAATTGGATGAAAATCTGCTTGTCACTTGGTCTGGA
ATTCAGATGCGACGCAGTTCCTGGCAAGATGGTGTTCTTGGTACAAATTGCCCTATCCCT
GCTAAATGGAACTTCACTTACCAGTTTCAAGTAAAGGATCAGATTGGTAGCTTCTTCTAT
GCTCCTTCCCTCAACCTACAGAGGGCATCTGGTGGTTTCGGTTCTTTTATTATCACAAAC
CGTAACATTATCCCTATTCCCTTTAGTCCTCCTGATGGGGATATAGTGATAATTATTGGA
GATTGGTACACCCGCGACCATAAGGCTTTGAGGAAGGACCTTGATGCTGGAAAGCAATTG
GGGATGCCAGATGGAGTACTTATTAATGGAAAAGGACCATTTAGATACAACACGACGTAT
GTGCCTGATGGGATTGATTACGAAACGATAAATGTTAATCCAGGCAAAACCTATCGGGTT
CGGGTGCACAATGTTGGAGTCTCTACTTGTTTGAATTTTAGGATTCAAAATCATAATTTA
CTCTTGGTGGAGACAGAGGGATATTACACCTCACAGCAGAATTATACTAGTGTAGATATT
CATGTTGGGCAATCTTACACATTTCTGGTTACTATGGATCAGAATGCAAGTAGTGATTAC
TACATTGTGGCGAGTCCTAGGTTTGTAAATCAATCACTCTGGCAGAAAGTAACTGGTGTT
GCTGTTTTGCATTATTCCAATTCCAAAGGAAACGCAGCGGGACCCCTTCCGGACCCTCCA
AATGATGCTTATGACACATCTTATGCACTGAATCAGGCCATGTCCATCAGGCAAAATGTT
TCTGCAAGTGGAGCTCGGCCGAATCCTCAAGGATCTTTCCATTATGGTCAAATTAATGTC
ACAGATGTTTATTTGTTAAAGAGTGTGCCACCAGTGGTAATTGATGGAAAACTTCGAGCT
ACGTATAATGGGATATCATTTAAAAATCCTGAAACTCCAATAAGGCTTGCCGATGTATAC
CGTGTGAAGGGTGACTACAAGCTTGATTTCCCAACCAAGCCAATGAACAGGCCACCCAAG
GTGGATACCTCCCTTATCAATGCGACGTACAAAGGATTTATAGAAGTCATATTGCAGAAC
AATGACACTGTAGCACAGAGCTTTCACATGGATGGTTACTCATTTTTTGTTGTTGGGATG
GGTTTTGGAGAATGGACAGAGAACAACAGGGGCTCTTATAATCGGTGGGATGCAATTTTC
CGGTCTACAACTCAGGTTTTTCCTGGAGGATGGACAGCAATCATGGCATCTCTTGACAAC
GTAGGGGTATGGAACCTCAGAGCAGAAAACCTGGACAGGTGGTATTTAGGGCAGGAAACT
TATATGAGAATCATTAATCCCGAAGATCATAGCAACAAAACAGAATTGCCAGTTCCTAGC
AATGCTCTCTACTGTGGTGCCCTTGCTTCTAAGCAGAAGCCACAGAAAACATCTTCAGCG
ACAACCATATTTAGAAGCTCGGAGATGTATCTTACGTTTATGTTGATATTCTCTGCTGTT
ATCAGTCTCCTATGCTAG

Peptide Sequence

PEP ID

XP_016483423.1
PEP Infomation

PREDICTED: monocopper oxidase-like protein SKS1 [Nicotiana tabacum]
Sequence

MGCRLCCIALLFTLCFAADPYVNFELEYSYITVSPLGVPQQVIAVNGKFPGPVLNVTTNY
NVVVNVKNKLDENLLVTWSGIQMRRSSWQDGVLGTNCPIPAKWNFTYQFQVKDQIGSFFY
APSLNLQRASGGFGSFIITNRNIIPIPFSPPDGDIVIIIGDWYTRDHKALRKDLDAGKQL
GMPDGVLINGKGPFRYNTTYVPDGIDYETINVNPGKTYRVRVHNVGVSTCLNFRIQNHNL
LLVETEGYYTSQQNYTSVDIHVGQSYTFLVTMDQNASSDYYIVASPRFVNQSLWQKVTGV
AVLHYSNSKGNAAGPLPDPPNDAYDTSYALNQAMSIRQNVSASGARPNPQGSFHYGQINV
TDVYLLKSVPPVVIDGKLRATYNGISFKNPETPIRLADVYRVKGDYKLDFPTKPMNRPPK
VDTSLINATYKGFIEVILQNNDTVAQSFHMDGYSFFVVGMGFGEWTENNRGSYNRWDAIF
RSTTQVFPGGWTAIMASLDNVGVWNLRAENLDRWYLGQETYMRIINPEDHSNKTELPVPS
NALYCGALASKQKPQKTSSATTIFRSSEMYLTFMLIFSAVISLLC

Transcript Sequence

Gene sequence data has not been registered.